Journal profile · Computer Science, Interdisciplinary Applications

JOURNAL OF MOLECULAR GRAPHICS & MODELLING

ISSN 1093-3263 · eISSN 1873-4243 · Elsevier Inc. · UNITED STATES · Bimonthly · Founded 1997

JOURNAL OF MOLECULAR GRAPHICS & MODELLING: CAS Zone 4 · Biology (2025 upgraded edition); impact factor 3.01; hybrid open access; APC about USD 3,940; median 83 days to acceptance (112 articles, last 24 months); community-reported acceptance: fairly easy (Elsevier website: 32%); 283 articles in 2025; indexed in SCIE and Scopus.

Impact factor3.01Latest value listed by LetPub
CAS zoneZone 4 · Biology2025 upgraded edition, major category · 2026 Xinrui edition Zone 3 · Biology
Review time83 daysMedian, submission to acceptance · 112 articles, last 24 months · PubMed
APCUSD 3,940Hybrid journal: charged only for open-access articles
AcceptanceFairly easy (Elsevier website: 32%)Community average
Articles per year2832025 · OpenAlex count

Scope

Aims, scope and focus

JOURNAL OF MOLECULAR GRAPHICS & MODELLING is published by Elsevier Inc. and is in Zone 4 of Biology in the CAS Journal Ranking (2025 upgraded edition). By OpenAlex counts of its recent articles, its largest topics are Computational Drug Discovery Methods, Protein Structure and Dynamics and Enzyme Structure and Function, together about 36.1% of its articles. Its main subfields are Molecular Biology. (generated from OpenAlex topic counts and CAS ranking data)

The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design.As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.JMGM is published in association with two of the largest and most active professional societies in the field: the Molecular Graphics and Modelling Society (MGMS) and the Computers in Chemistry (COMP) Division of the American Chemical Society. Several thousand computational chemists worldwide belong to these two societies and any research topic that may of interest to the membership is within the wide scope of the journal. It is not necessary to be a member of these professional societies to publish in the journal.Published in association with the Molecular Graphics and Modelling Society www.mgms.org and the ACS Division of Computers in Chemistry.

From the journal's Aims & Scope

Research area (LetPub): Computer Science, Interdisciplinary Applications

Editorial board by country: 8 in mainland China (about 14%); most named United States 15, United Kingdom 10, Mainland China 8, India 4, Pakistan 3 (57 members with a country) Editorial board ↗Publisher website ·

Main research topics OpenAlex counts of recent articles; shares are approximate

  1. Computational Drug Discovery MethodsComputer Science18.9%
  2. Protein Structure and DynamicsBiochemistry, Genetics and Molecular Biology12.1%
  3. Enzyme Structure and FunctionMaterials Science5.1%
  4. Human auditory perception and evaluationEngineering4.1%
  5. Graphene research and applicationsMaterials Science4.1%
  6. Diverse Scientific and Economic StudiesEconomics, Econometrics and Finance4%
  7. Educational Robotics and EngineeringComputer Science4%
  8. RNA and protein synthesis mechanismsBiochemistry, Genetics and Molecular Biology3.9%

Rankings & indexing

CAS ranking and database indexing

CAS Journal Ranking

CAS Journal Ranking, upgraded edition (March 2025)Biology Zone 4
LevelCategoryZone
MajorBiologyZone 4
MinorCrystallographyZone 2
MinorBiochemical Research MethodsZone 4
MinorBiochemistry & Molecular BiologyZone 4
MinorComputer Science, Interdisciplinary ApplicationsZone 4
MinorMathematical & Computational BiologyZone 4

Top journal: noReview journal: no

CAS Xinrui Journal Ranking (March 2026)Biology Zone 3
LevelCategoryZone
MajorBiologyZone 3
MinorBiochemical Research MethodsZone 3
MinorBiochemistry & Molecular BiologyZone 3
MinorComputer Science, Interdisciplinary ApplicationsZone 4
MinorCrystallographyZone 2
MinorMathematical & Computational BiologyZone 3

Top journal: noReview journal: not marked

CAS Journal Ranking, previous upgraded edition (December 2023)Biology Zone 4
LevelCategoryZone
MajorBiologyZone 4
MinorCrystallographyZone 3
MinorBiochemical Research MethodsZone 4
MinorBiochemistry & Molecular BiologyZone 4
MinorComputer Science, Interdisciplinary ApplicationsZone 4
MinorMathematical & Computational BiologyZone 4

Top journal: noReview journal: no

Database indexing

SCIEScopusLetPub

International journal early-warning lists: not listed in any editionLetPub

Editions, and major and minor categories, are shown separately and never merged into one zone; check which edition your institution uses before you submit or report.

Metrics

Impact metrics and publication volume

Impact

Impact factor
3.01LetPub ·
Impact factor (publisher)
3.1Publisher website ·
CiteScore 2026-06
6.1LetPub ·
CiteScore (publisher)
6.1Publisher website ·
SJR 2026-06
0.5LetPub ·
SNIP 2026-06
0.69LetPub ·
h-index
67LetPub ·
h-index
96OpenAlex ·
i10-index
2,122OpenAlex ·
2-year mean citedness
2.7OpenAlex ·
Self-citation rate
6.5%LetPub ·
Share of gold OA articles
8.62%LetPub ·

Volume

Articles per year
266LetPub ·

Articles by year OpenAlex count · 4,506 in total · the current year is incomplete

YearArticlesOpen accessCitations
202627734139
202528336832
2024178281,024
2023247402,617
2022229472,651
2021239483,399

Sources count differently and were observed at different times, so each source's own value is kept; "publisher" marks figures from the journal's website.

Review & acceptance

Review time and acceptance

Review time from article dates manuscript dates registered with PubMed · to

83 daysMedian, submission to acceptance · P25–P75 55 days – 114 days

Acceptance to online
median 3 days (112 articles)
Submission to online
median 84 days
Sample
112 articles with submission and acceptance dates (634 in the window); the latest was accepted on

Only articles that were accepted and published are counted, not the time spent on rejected manuscripts, so this usually runs longer than a publisher's "time to first decision".

Other sources

Average review time (community reports)
about 3 monthsLetPub ·
Average acceptance (community reports)
32%LetPub ·
Submission to first decision
5 daysPublisher website ·
First decision after review
51 daysPublisher website ·
Submission to acceptance
101 daysPublisher website ·
Acceptance to publication
3 daysPublisher website ·
Peer review
Single anonymous peer reviewPublisher website

Community reports come from authors' own submissions (confidence 0.5) and are not a promise from the journal; for publisher figures, the journal's own definitions apply.

Fees & open access

APC and open-access policy

Hybrid open accessLetPub

A subscription journal in which authors can pay to publish their article open access.

SourceAPCFee waiverLicenseObserved
OpenAlexUSD 3,940 / EUR 3,690 / GBP 3,150 / JPY 488,680——
Publisher websiteUSD 3,810——

A hybrid journal charges the APC only when the author chooses open access; publishing under the subscription model is usually free.

The journal's website is authoritative for fees; sources were observed at different times and each keeps its own value, without averaging.

Submission

Article types and submission policies (journal website)

What to prepare5 items from the author guidelines
Abstract
≤ 250 words
Keywords
1–7
Reference style
Numbered, in order of citation
Highlights
Required
Graphical abstract
Required
Publisher website · model-extracted, each line checked against the text
Article types accepted2
  1. commentaryThe editors also welcome authoritative review articles or commentaries on any aspect of molecular modeling and computational chemistry. If you are interested in…Length not stated
  2. review articleThe editors also welcome authoritative review articles or commentaries on any aspect of molecular modeling and computational chemistry. If you are interested in…Length not stated
Publisher website
Policy excerpts from the journal's websiteAI use, Authorship, Conflicts of interest, License & copyright, Open access, Peer review, Preprints
AI use Declaration of generative AI use

Authors must declare the use of generative AI tools in the manuscript preparation process upon submission of the paper.Generative AI and AI-assisted technologies (“AI tools”) have been rapidly adopted in research and scholarly publishing, offering significant benefits while requiring clear standards for responsible and transparent use.Authors preparing a manuscript for this journal may use AI tool…

Source ↗Publisher website ·
Authorship Group authorship

Group authorship refers to the attribution of an article to a defined and named group of authors whose members have contributed to the work. Examples include research consortia, clinical trial groups, collaborative networks, task forces or working groups, expert panels or consensus groups, and participatory research groups. Group authorship must be declared on the title page at submission. When av…

Source ↗Publisher website ·
Conflicts of interest Declaration of competing interests

All authors must disclose any financial and personal relationships with other people or organizations that could inappropriately influence or bias their work. Examples of potential competing interests include:EmploymentConsultanciesStock ownershipHonorariaPaid expert testimonyPatent applications or registrationsGrants or any other fundingAffiliation with the journal as an Editor or Advisory Board …

Source ↗Publisher website ·
License & copyright License options

Authors will be offered open access user license options which will determine how you, and third parties, can reuse your open access article. We advise that you review these options and any funding body license requirements before selecting a license option.

Source ↗Publisher website ·
Open access Open access

We refer you to our open access information page to learn about open access options for this journal.

Source ↗Publisher website ·
Peer review Peer review

This journal follows a single anonymized review process. Your submission will initially be assessed by our editors. If your submission is deemed suitable, it will typically be sent to be reviewed by a minimum of two reviewers for an independent expert assessment of the scientific quality. The decision as to whether your article is accepted or rejected for publication will be made by our editors.Re…

Source ↗Publisher website ·
Preprints Preprints

Preprint sharingAuthors may share preprints in line with Elsevier's article sharing policy. Sharing preprints, such as on a preprint server, will not count as prior publication.We advise you to read our policy on multiple, redundant or concurrent publication. In support of Open Science, this journal offers its authors a free preprint posting service on SSRN, Elsevier’s preprint and early research …

Source ↗Publisher website ·

Excerpts are quoted from the journal's website; "model summary" lines are written by Workers AI and checked against the text. The journal's website is authoritative.

Profile

Publication details and official links

Publisher
Elsevier Inc.
Country or region
UNITED STATES
Language
English
Frequency
Bimonthly
Founded
1997
ISSN
1093-3263
Electronic ISSN
1873-4243
Society / sponsor
Molecular Graphics and Modelling Society www
Official links

FAQ

Frequently asked questions about JOURNAL OF MOLECULAR GRAPHICS & MODELLING

What CAS zone is JOURNAL OF MOLECULAR GRAPHICS & MODELLING in?

In the 2025 upgraded edition of the CAS Journal Ranking, JOURNAL OF MOLECULAR GRAPHICS & MODELLING is in Zone 4 of Biology, and in Zone 2 of the minor category Crystallography / Biochemical Research Methods / Biochemistry & Molecular Biology / Computer Science, Interdisciplinary Applications / Mathematical & Computational Biology. In the 2026 Xinrui edition it is in Zone 3 of Biology. Zones from different editions, and from major and minor categories, are not interchangeable.

What is the impact factor of JOURNAL OF MOLECULAR GRAPHICS & MODELLING?

The latest impact factor listed by LetPub is 3.01; CiteScore 6.1, h-index 96.

How long does peer review take at JOURNAL OF MOLECULAR GRAPHICS & MODELLING?

Based on the dates recorded on 112 articles published between October 2024 and October 2026 (the last 24 months), the median time from submission to acceptance is 83 days (interquartile range 55–114 days); authors report an average review time of about 3 months; the community-reported acceptance is “Fairly easy (Elsevier website: 32%)”. Article statistics cover accepted papers only, publisher figures follow the journal's own definitions, and community reports come from authors' own submissions; none is a promise from the journal.

What are the manuscript requirements of JOURNAL OF MOLECULAR GRAPHICS & MODELLING?

According to the journal's author guidelines: Abstract: ≤ 250 words; Keywords: 1–7; Reference style: Numbered, in order of citation; Highlights: Required; Graphical abstract: Required. A model extracted these from the author guidelines and each was checked against the text; check the latest version on the journal's website before submitting.

Where are the editorial board members of JOURNAL OF MOLECULAR GRAPHICS & MODELLING based?

Of the 57 board members whose country the journal's board page names, 8 (about 14%) are in mainland China; the countries named most often are United States (15), United Kingdom (10) and Mainland China (8). Counted from the institutions listed on the board page; for reference only.

Which databases index JOURNAL OF MOLECULAR GRAPHICS & MODELLING?

According to LetPub and DOAJ records, JOURNAL OF MOLECULAR GRAPHICS & MODELLING is indexed in SCIE and Scopus.

Is JOURNAL OF MOLECULAR GRAPHICS & MODELLING open access, and what is the APC?

JOURNAL OF MOLECULAR GRAPHICS & MODELLING is a hybrid journal. For open-access publication: APC about USD 3,940.

Sources and updates

The facts on this page come from LetPub, Publisher website, OpenAlex; every figure is tagged with its source and the date it was observed, and conflicting values are kept per source. LetPub source page: view ↗ (archived 2026-08-25). Last updated: .